CDS

Accession Number TCMCG066C21953
gbkey CDS
Protein Id XP_034596415.1
Location complement(join(41816798..41816944,41817034..41817108,41817197..41817316,41817405..41817458,41817542..41817764,41817838..41817917,41818009..41818098,41818203..41818316,41818816..41818896,41818996..41819109,41819273..41819318,41819392..41819489,41819561..41819680,41819790..41819882,41820622..41820678,41820770..41820842,41820938..41821056,41821176..41821268,41821391..41821708,41821795..41821914,41822011..41822124,41822236..41822415,41822599..41822713,41822795..41822958,41823197..41823382,41823510..41823600,41823708..41823772,41824678..41824752,41824839..41824922,41825009..41825176,41825974..41827107))
Gene LOC117857704
GeneID 117857704
Organism Setaria viridis

Protein

Length 1536aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034740524.1
Definition DNA polymerase alpha catalytic subunit [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA polymerase
KEGG_TC -
KEGG_Module M00261        [VIEW IN KEGG]
KEGG_Reaction R00375        [VIEW IN KEGG]
R00376        [VIEW IN KEGG]
R00377        [VIEW IN KEGG]
R00378        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K02320        [VIEW IN KEGG]
EC 2.7.7.7        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03030        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03030        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0000726        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003887        [VIEW IN EMBL-EBI]
GO:0003896        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005658        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006269        [VIEW IN EMBL-EBI]
GO:0006270        [VIEW IN EMBL-EBI]
GO:0006271        [VIEW IN EMBL-EBI]
GO:0006272        [VIEW IN EMBL-EBI]
GO:0006273        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0022616        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0030894        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0032993        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034061        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0043601        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGACGCATCCGGCGACGCCGCCGGGTCCGGCCGTCGCACGCGCACCCGGGGCTCCGAGGCGGTGGCGCGGTCCGCCGCGCTCGACCGCCTCCGCGCCATCATAGAGGGTAGGACCCGGGCCGCCGACGCCGTCCAGGTGAAGGTTGACGCCCCGATCTACGACACCGTCGCGGAGGAGGACTACAACGCGCTCGTCGCCCGCCGCCGCAAGGAAGCTGGCGAGTTCATCATCGACGACGACGGGCTCGGCTACGCCGAGGATGGTCGCGAGGAGGATTGGACCCACCGCGCCCTTCCCTCCTCCTCCGACGAGGGATCCGACGGCGAGGACGGCGCCCGCCGCAAGCGGAAGCAGCCGCGCCCTCCCCAGCCCAAGCGCCCGCCGCAGCAGTCCGCCGCGGCGGCGTCTCTCTCCGCCGCCGCCGCCATGATGGGCAAGCAGCGAATCCCTACTATGTTCACCTCCCCGATGTTTAAGAAGCCTGGCAGCGACCGCAACAAGGGTTCGGCTCTGGTTGCCGACAGCATCGTGGACGACGTCATCGCCGAATTCGCACCTGACGACAACGACCGCGAGGAGAGGCGGCGGCGGGTCAGTAGGGTTTCTGCCCCGCAGCCTCCTCCCCCAATAATTGCCCACATCAACTCGGAAAAGGTTGTTGCAGATGCTGAAACTGTGGTCAGATCGGACACTGGGTTTGAAACTGATGGGGTTTCAGACCATGGAAATGATATGGTCGTGGAATTGAAGCCGGATGATGAGATGGCAACCAAATTGGAAGAAGCTTCTGGTTCTAGTGCTCAGCTAGTGGTCGAGAATAAGAGTTCAGAGGAACTGAAGCAGGAGGCTAATGGGGAAGTGAAGATAGAGAAGGTGCACCGCCTCAACGCAAAGATTAAGGCAGAGCAGAACAGAAATGGTGGTATGACGAGTGCAGCAGCAGGGTGGATGAAGGTATGTGGTGATGGAGAGAATGCAGGAGTTGAAGGAGGGGTGGCTTCAGGTAATGCAGACGTGGATGAAAGCTCAGAGTTTGAGCTGAAGGATGGAGCACTGCCATTCTACATATTGGATGCATATGAGGAACCATTCGGTGCTAATTCAGGCACAGTGTATTTGTTTGGGAAGGTTGAAGTTGGCAAGCAGTTCCATAGTTGCTGTGTCATAGTAAAAAATATTCAGAGATGTGTCTATGCTATTCCGAACCGTTCAGTCTTCCCAAGGGAGTCCTTATCAGGGCTAGAGAAGAAGTCTACAAATTCTGATTTTCTACCATCTCTCCGAGCAACTCTACATGAGTTGGCATCTGGATTAAAGAGTGAAATAGCTGATAAACTGTCAGACCTCAATGTGTCAAATTTTGTAATGACTCCAGTCAAGAGGAACTATGCATTTGAGAGGACTGATTTACCAAATGGAGAACAGTATGTCCTGAAAATCAATTACCCATACAAGGATCCCGTCCTTCCAGCTGACCTCAGAGGTGAACATTTCCATGCGCTGCTTGGGACAAACAATAGTGCTCTTGAATTGTTTCTCATCAAAAGGAAGATCAAGGGGCCTTCATGGCTGTCAGTTTCCAAATTTGTTACACGGCCATCTACTCAGCGGGTCAGCTGGTGTAAGTTTGAAGTCGCAGTTGATTGCCCAAAGGACATATCTGTTTTGACGACAAGTACATCCCTAGAAGCCCCCCCTGTTGTAGTTGCTGCAGTCAATCTCAAAACTATCATAAATGAGAAACACAATGTGCATGAGATTGTGTCGGCATCTGTCATATGCTGTCACCGGGTGAAGATTGATAGTCCAATGCGTCCTGAAGATTGGCAGAAACGGGGAATGATCAGCCATTTTACTGTTATGCGCAAGCTTGAAGGTAGCATATTTCCTATAGGCCTTACTAAGGAAGCTTCTGATAGAAACCAGAAGGCTGGTAGCAATGTGCTGGCACTAGAAAGCAGTGAACGCGCATTGTTAAATCGCTTGATGATTGAGCTTAGCAAACTTGATTGCGACGTACTTGTGGGACACAATATTTCGGGATTCGACCTGGATGTCCTTCTACACCGTGCTCAGACCTGCAAGGTGCTAAGTAGCATGTGGTCCAAGATTGGTCGTCTCAGGCGATCAATAATGCCCCGGCTTACCAAAGGAAACACACTATATGGTTCCGGGGCAAGTCCAGGAATTATGTCCTGTATTGCTGGTCGTCTTCTCTGTGATACCTATTTATGCTCTCGTGACCTTCTGAAGGAGGTGAGTTATTCATTGACGCAACTTGCAGAAACACAATTGAAAAAGGACAGAAGAGAGGTTTCTCCACATGATATACCTCCGATGTTCCAGTCTTCTGGAGAACTTTTGAAACTGGTTGAATATGGTGAGACTGATGCATGGCTTTCTTTGGAGCTCATGTTTCACTTGAGTGTTCTCCCTCTGACACGTCAGCTGACCAACATTAGTGGTAACCTGTGGGGTAAAACGCTTCAGGGTGCTAGGGCTCAGAGGGTAGAATATCTACTATTGCACTCATTCCATGCAAAAAAATTTATTGTACCGGATAAGTTTGCACGCAACAAAGAGCTGAACTCCACAAAACGAAAAATGAATGCTGATACTGAGGGTGCAAATGCCGATGATGGTGCTGCTGATCCTTCTGTTGATGATGAGGGGCATAATGGTGATCAAGTTAAAGCCAGAAAAGGACCTTCATATGCTGGTGGTTTGGTTTTGGAGCCTAAGAAGGGTCTATATGACAAGTATGTTCTACTTCTGGACTTCAACAGTCTTTACCCTTCAATAATTCAGGAATACAACATCTGCTTTACCACTGTTGAGCGTTCTTCTGACGGCAATGTTCCTAGCTTACCAGCTTCAAAAGCTACTGGTGTTTTACCTGAGTTGCTGAGGAGTTTGGTGGAGAGGAGAAGAATGGTTAAATCGTGGCTGAAGACTGCTTCTGGTCTTAAAAGACAACAGTTTGATATTCAACAGCAAGCATTGAAGCTTACTGCAAATAGCATGTATGGTTGCTTGGGCTTTTCCAATTCCAGGTTTTATGCGAAGCCACTTGCTGAGCTTATTACATTGCAAGGAAGAGAGATCTTGCAGAACACCGTTGATCTGGTTCAGAATAATTTAAATTTGGAGGTTATTTATGGTGACACTGACTCCATTATGATACATACTGGACTTGATGACATCTCCAGGGCAAAAGCAATAGCAGGAAAGGTCATTCAGGAGGTGAACAAGAAGTACCGTTGTCTGGAGATTGATCTTGATGGCATATACAAAAGAATGTTACTTCTTAAAAAGAAGAAGTATGCTGCTATTAAAGTGGCACTGGATGGCAGCTTACGCGAGAACATTGAACGCAAGGGGCTCGATATGGTCAGACGTGATTGGAGTTTGCTTTCAAAAGAAATCGGAGATTTTTGCCTAAATCAAATTTTGTCTGGAGGGACATGCGATGATGTTATTGAGTCAATTCATAGTTCTCTTGTCCAGGTGCTAGAGCAAATGAGAAGTGGTCAAATAGAGCTTGAAAAATATGTTATCACAAAAAGTTTGACAAAAGCACCAGAAGATTATCCAGATGCTAAAAATCAGCCTCATGTTCAGGTTGCTTTGAGACTGAGGCAAAATGGTTACTCTGGTTGCTCTGCTGGTGATACGGTCCCTTATATAATTTGCTCTCAGCAGGATTCAGATAATACACATTCTGCGGGAATAGCTCAAAGAGCTAGACATCCTGAGGAGTTGAAAAGAGACCCTGACAAGTATATGATTGACATTGAGTACTATTTGTCACAACAGATTCATCCAGTTGTTTCTCGTCTGTGTGCTTCCATTCAGGGTACTAGCCCAGCCCGTCTTGCGGAATGTCTGGGACTTGATTCGTCTAAGTTCCAATCAAGATTGACTGAGTCTAGCAATCAAGATACATCTACCATGCTGCTATCTGTAATCGATGATGAAGATGAGAGATATCGTGGTTGTGAACCACTGCGTTTATCATGTCCAAGCTGTTCTGGTACCTTTGACTGCCCCCCTGTATCTAGTCTGATTACTAGTGCTAGTCCGACAAGTGTATCAGATTCGGATGAAGCAAAAGATGCTACTGCTAATTTCTGGCGTCGAATGCGGTGCCCAAGATGCCCAGATAACGTTGATGATTCCAGGATTTCCCCTCCTGTGCTCGCCAACCAGATGAAAAGACAGGCTGATAATTTCATCAACATGTATTATAAAGGTTTGCTGACGTGTGATGATGAGGGTTGCAAATACTCGACTCACAGCGTAAACCTTAGAGTAATGGGGGATTCTGAGAGAGGAACCATCTGCCCTAACTATCCACGCTGCAATGGTCGCCTAGTAAGACAGTACACGGAGGCGGATCTGTACAGGCAGCTATCCTACTTTTGCTATGTACTTGATGCAACCCGGTGCCTTGATAAGCTGGATCAGAAGGCAAGGCTCCCTTTCGAGAAAGAGTTTGCTGCAGTTGGCCAAACCATCAACTTGACACTGATGGAGATTCAGAAAATCCGAGATAGATGTGCATTTGGATGGGTTCAGCTGGAGGATCTTGCCGTGTCAATCTGA
Protein:  
MDDASGDAAGSGRRTRTRGSEAVARSAALDRLRAIIEGRTRAADAVQVKVDAPIYDTVAEEDYNALVARRRKEAGEFIIDDDGLGYAEDGREEDWTHRALPSSSDEGSDGEDGARRKRKQPRPPQPKRPPQQSAAAASLSAAAAMMGKQRIPTMFTSPMFKKPGSDRNKGSALVADSIVDDVIAEFAPDDNDREERRRRVSRVSAPQPPPPIIAHINSEKVVADAETVVRSDTGFETDGVSDHGNDMVVELKPDDEMATKLEEASGSSAQLVVENKSSEELKQEANGEVKIEKVHRLNAKIKAEQNRNGGMTSAAAGWMKVCGDGENAGVEGGVASGNADVDESSEFELKDGALPFYILDAYEEPFGANSGTVYLFGKVEVGKQFHSCCVIVKNIQRCVYAIPNRSVFPRESLSGLEKKSTNSDFLPSLRATLHELASGLKSEIADKLSDLNVSNFVMTPVKRNYAFERTDLPNGEQYVLKINYPYKDPVLPADLRGEHFHALLGTNNSALELFLIKRKIKGPSWLSVSKFVTRPSTQRVSWCKFEVAVDCPKDISVLTTSTSLEAPPVVVAAVNLKTIINEKHNVHEIVSASVICCHRVKIDSPMRPEDWQKRGMISHFTVMRKLEGSIFPIGLTKEASDRNQKAGSNVLALESSERALLNRLMIELSKLDCDVLVGHNISGFDLDVLLHRAQTCKVLSSMWSKIGRLRRSIMPRLTKGNTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAETQLKKDRREVSPHDIPPMFQSSGELLKLVEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHSFHAKKFIVPDKFARNKELNSTKRKMNADTEGANADDGAADPSVDDEGHNGDQVKARKGPSYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERSSDGNVPSLPASKATGVLPELLRSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIHTGLDDISRAKAIAGKVIQEVNKKYRCLEIDLDGIYKRMLLLKKKKYAAIKVALDGSLRENIERKGLDMVRRDWSLLSKEIGDFCLNQILSGGTCDDVIESIHSSLVQVLEQMRSGQIELEKYVITKSLTKAPEDYPDAKNQPHVQVALRLRQNGYSGCSAGDTVPYIICSQQDSDNTHSAGIAQRARHPEELKRDPDKYMIDIEYYLSQQIHPVVSRLCASIQGTSPARLAECLGLDSSKFQSRLTESSNQDTSTMLLSVIDDEDERYRGCEPLRLSCPSCSGTFDCPPVSSLITSASPTSVSDSDEAKDATANFWRRMRCPRCPDNVDDSRISPPVLANQMKRQADNFINMYYKGLLTCDDEGCKYSTHSVNLRVMGDSERGTICPNYPRCNGRLVRQYTEADLYRQLSYFCYVLDATRCLDKLDQKARLPFEKEFAAVGQTINLTLMEIQKIRDRCAFGWVQLEDLAVSI